Watching (Through Data) How Restored Plant Communities Assemble Themselves: A Long and Nerdy Ecology Post

Quick reminder: Applications for the J.E. Weaver grants ($1500) for graduate students working on conservation topics related to the Great Plains are due March 3, 2023. Information can be found here.

This one’s for the real prairie nerds out there. It’s long, full of data, and will probably appeal mostly to people who restore prairies or study prairie restoration. Apologies to those of you who mainly follow this blog for the pretty photos…

Despite the obscene number of graphs, I do think there’s a pretty fascinating story here. I’ll do my best to tell it in a compelling way. The story starts with the pattern with which a brand new prairie plant community assembles itself. That’s a good tale in itself, but then I compare that pattern to two other nearby plantings with surprising (to me) results. Finally, the significant role of land stewardship and its impact on establishment fills the third and final chapter of the story.

Silky prairie clover (Dalea villosa) and Junegrass (Koeleria macrantha) in the Derr Pivot sandhills restoration (July 2014 photo).

First, the basic information:

The 100 acre Derr Pivot prairie restoration was planted into a former soybean field in the fall of 2001. We call it a 2002 restoration because 2002 was its first growing season. The site is located in some sandy hills south of the river at The Nature Conservancy’s Platte River Prairies. Seed for the project was locally-harvested and the seed mix included 165 plant species. The first three growing seasons for the planting were drought years but it established well with few invasive species issues other than some Siberian elm trees.

Since its third growing season (2004), I’ve been collecting plant community data from the site. Every other year, I go out with a 1x1m plot frame and list the plant species within 70-100 sampling plots scattered across the site in a stratified-random pattern (not permanent plots). From that, I can calculate both the species richness (number of species) and floristic quality of each square meter plot. Averaging those across the site gives me the mean species richness and mean floristic quality for that year.

(Reminder, if you want better views of graphs and photos, click on them. If you’re reading this within an email message, click on the post’s title to open it on the website and then clicking on images will work for you.)

Mean Floristic Quality (left) and Mean Species Richness (right) calculated from surveys of 70-100 1x1m quadrats. Both graphs seem to indicate a pretty rapid establishment of a plant community and then relative stability afterward. Error bars indicate 95% confidence intervals.

As you can see from the two graphs above, both the mean species richness and mean floristic quality increased during the first 8-10 years or so and then have leveled off. I’ve also found 143 plant species in those surveys, though that’s not a complete inventory of species, since those 1×1 plots don’t sample a very big percentage of the area each year.

That’s the boring background information. If you’re still with me, here’s where I’ll try to make it more interesting.

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CHAPTER 1 – A PLANT COMMUNITY FORMS

In addition to calculating richness and floristic quality metrics, I can also look at the frequency of occurrence of each species (the percent of 1×1 plots each species was found in) through the years. It doesn’t work well for plant species of low abundance, but for major grasses and forbs, I can look at how the abundance (essentially) of each species changed over time. Most of those species increased in occurrence over time and then leveled off. Others, like the three grasses and one sedge in the graph below, appear not to have hit their peak yet, even after 20 years.

Four surprisingly similar establishment trajectories for graminoids.

The graph shows the increasing frequency of occurrence of three grasses and one sedge (Carex brevior) over the first 20 years of this restored prairie’s life. Kentucky bluegrass wasn’t seeded, of course, and short-beaked sedge had a limited amount of seed, which helps explain why both started slowly. However, we had lots of switchgrass and Indiangrass seed, so why is it taking so long to fill in? That’s especially interesting because big bluestem – shown a few graphs below this – jumped out of the ground and was ubiquitous within a handful of years.

These graphs illustrate the assembly of a brand new prairie plant community over a 20 year period. Some species showed up in abundance within the first few years, but most started slowly and spread over time. The rate at which species increased in abundance to a point at which they seemed to reach their saturation point varied quite a bit.

The graph below, for example, shows three very different patterns. Stiff sunflower (Helianthus pauciflorus) raced out to a fast start, and by year seven I was picking it up in 4 out 5 sampling plots. It has stayed roughtly at that level ever since. Canada goldenrod (Solidago canadensis) increased steadily until it was in half of my sampling plots in the 11th year of the planting, but then decreased just as steadily back to only 20% occurrence by year 20 – the same place it had been in year three. Round-headed bushclover (Lespedeza capitata), which is mostly found on hill tops and higher slopes, also took about 11 years to reach its peak, but, unlike the goldenrod, has maintained that level of abundance ever since.

Three very different patterns of establishment among common forb species in the restored prairie.
This 2018 photo (year 17 of the prairie’s establishment) shows round-headed bushclover and stiff sunflower growing abundantly on a sandy hill top, surrounded by Junegrass, big bluestem, and many other plants. Each of those species followed its own path toward establishment in the community.

I mentioned big bluestem earlier. The graph below shows that big bluestem was already above 50% occurrence in the third year of the planting. That’s a significant difference from switchgrass, which was at 11% that year, and Indiangrass, which didn’t show up in any of my sampling plots at that stage. I don’t have an explanation for that, especially because harvested the grass seed myself with an old Massey combine, and while big bluestem was the most common of those three species in the sites I harvested, there was lots of Indiangrass and switchgrass too.

Canada wildrye and big bluestem show opposite patterns of abundance through time, though both were fast starters.

Even more fascinating to me, though, is the contrasting pattern of occurrence between big bluestem and Canada wildrye (Elymus canadensis). We worked hard to harvest lots of Canada wildrye seed because we know it tends to establish quickly but isn’t competitive against the other species we plant. That certainly held true here. It was at 86% occurrence at year three. But then, as big bluestem increased in abundance, Canada wildrye decreased, leveling out at 40-50% frequency of occurrence by year 9. It has held steady there since. I love being able to see evidence that supports the way I thought these two species worked in our plant communities. Big bluestem is a dominant force and Canada wildrye is more opportunistic, though both are perennial species.

In contrast to big bluestem and Canada wildrye, two other grasses started out very slowly, and continue to increase very gradually. Scribner’s panicum (Panicum oligosanthes) is a great little native grass for which we had harvested very little seed. It’s not surprising, then, that it took a while to get going, and I’m encouraged that it continues to become more and more a part of the community. Smooth brome, on the other hand, can go jump in a lake as far as I’m concerned, but seems intent on slowly creeping in from the edges of the site. That could become a more significant issue over time if it suppresses plant diversity. So far, though, even at sites where it has already become much more widespread, our management seems to be keeping it from having a big effect on the community. We’ll see.

Finally, I wanted to talk about two grasses that are tied mostly to hill tops where the soil texture is most sandy. That restrictive habitat preference means they’ll be limited to a lower level of abundance than other species and both appear to have reached it. Junegrass (Koeleria macrantha), however, hit its plateau in year 5, while it took prairie sandreed (Calamovilfa longifolia) about 13 years to get to the same place (see graph below). I wouldn’t have guessed that, based on our seed harvest. We collected Junegrass by hand and didn’t have a particularly bounteous harvest, as I recall. I harvested prairie sandreed with our combine, and worked hard to get a lot of it, knowing it would do well in the sandhill habitat we were planting.

I think the explanation for Junegrass’ rapid rise is that it spread quickly by seed from its initial establishment points. It showed up right away from the seed we planted and then filled in the space around those first plants very quickly. Prairie sandreed, on the other hand, seemed to take a while to become full-size blooming plants, and appears to have spread primarily through rhizomes. Sandreed clones are now getting large (but are diffuse, not monocultures) and many are bigger than my kitchen. (You know my kitchen, right? The standard by which ecologists measure grass clones.)

Many species in the planting, including this shell leaf penstemon (Penstemon grandiflorus), are hugely variable in their abundance from year to year. It’s hard to pick up the patterns of that abundance with every-other-year sampling. This photo was taken in 2013, the year after the severe 2012 drought. The penstemon was one of a group of opportunists that thrived in that brief post-drought period of lower grass competition.

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Ok, that’s Chapter 1. Compelling? No? Ok, give me a chance with Chapter 2 before you bail.

CHAPTER 2 – EVERY SITE IS DIFFERENT. MAYBE?

Having mined the data from the Derr Pivot site, I decided it would be interesting to compare the patterns of species establishment to that of other nearby plantings we’d done. I expected to see a lot of variation in those patterns because anyone who has done restoration work knows there’s a lot of unpredictability in that process. As it turned out, I found much more similarity than I’d expected.

I used two other restored prairies as comparisons. The first, the Derr West 2002 restoration was planted in the same year as the Derr Pivot, used seed from the same harvest effort, and is located a few hundred yards to the west. It had a more diverse seed mix because it was a more mesic site in alluvial soils, and we created some wetland sloughs that required appropriate seed. Basically, it received the same seed mix as the Derr Pivot site, but with the addition of wetland and wet-mesic species, bringing the species total in the mix to 218. I’ve been collecting data from Derr West every year since 2002, but am only showing data from every other year to match up with the Derr Pivot dataset.

The second site was planted two years earlier, and is called the Dahms 2000 planting. It is adjacent to the Derr West planting (just to the south), so all three of these sites are within the same square mile of land. The Dahms 2000 is also a mostly-mesic site on alluvial sandy loam soils, with some created wetland sloughs. The seed mix for it included 202 species. I collected data every other year from this site, but started doing so in alternating years to the Derr Pivot, so the time scale on the graphs doesn’t match perfectly.

Despite the similar geographic settings of all three, and the same seed mix (mostly) and establishment year for two of them, I expected to see a lot of variation in the rate at which individual species expressed themselves in community assembly. It’s fun to be wrong.

Let’s start with the three forbs I talked about earlier: stiff sunflower, Canada goldenrod, and round-headed bushclover. The two additional sites didn’t have enough abundance of the bush clover to track it, so I eliminated that one from the graphs below. But stiff sunflower and Canada goldenrod patterns were relatively similar between the three sites. They aren’t exact replicas, of course, but there’s more similarity than I’d expected.

Comparisons of stiff sunflower and Canada goldenrod establishment patterns across three sites.

Stiff sunflower took longer to hit its plateau in abundance at the second and third sites, compared to the Derr Pivot, but it still reached similar levels in all three plantings. We had a lot more seed for this species for the 2002 plantings than the 2000 planting, which might account for its faster start in those sites. Either way, though, the species worked its way into about 70-80% frequency of occurrence in all three plantings. Fascinating.

Canada goldenrod is much less abundant at both the additional sites, but in all three sites, its abundance is about the same in year 20 or 21 as it was in year 3 or 4. All three sites also appeared to see a bump in that abundance around 2012, though that may or may not be a real pattern. I know a lot of restoration sites have trouble with Canada goldenrod (or tall/late goldenrod, which in Nebraska is usually treated as a variety of Canada goldenrod). We seem to be fortunate here because Canada goldenrod doesn’t usually act aggressively in our plant communities.

Next, let’s compare smooth brome and Scribner’s panicum, the two grasses that were slowly adding themselves to the community in the Derr Pivot. Scribner’s panicum is in the 2002 site, but at a low enough abundance that it isn’t yet able to be reliably tracked with my data collection method. In the Dahms 2000 restoration, though, it shows a remarkably similar pattern to that in the Derr Pivot, though it waited a little longer to show up in the data. I think we had even less seed for it in the 2000 planting than we did for the 2002 plantings, so that makes sense.

Scribner’s panicum (blue) and smooth brome (red) across three sites.

Smooth brome is also showing a very similar pattern of growth between the Derr Pivot and Dahms 2000 sites, including a temporary boost following the 2012 drought. The Derr West site shows a much faster establishment rate, but I can explain that. When that site was still a crop field, there was a weird peninsula of smooth brome and Siberian elm trees that extended into the field. When we prepared the site for restoration, we (I) did a poor job of killing those species out and during wetland construction, and brome sod got spread around the site, speeding its invasion. Sorry about that, everyone.

The similarities continue with big bluestem and Canada wildrye, which exhibit that same opposite pattern of establishment across all three sites. Canada wildrye ended up as a less significant player in the Derr West site than in the other two, but still followed the same kind of path to get there – starting high and the dropping low as the rest of the community filled in around it.

The final graph is the one that most surprised me. I just about fell out of my chair when I first put all three of these next to each other. I’ve spent my whole career being amazed by the complex and (to us) unpredictable nature of prairies and the restoration process. Now I look at these data and wonder if I’ve just been too dumb to notice patterns all around me.

For the record, I haven’t actually changed my mind about the complex and unpredictable nature of prairies. It is really neat, though, to discover some patterns in how things seem to work. I’d love to hear from other restoration sites about whether any data they might have line up with the patterns I’m seeing here. I also wish I’d had time to collect this kind of intensive data from more sites around here to see how consistent these patterns really are.

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CHAPTER 3 – LAND STEWARDSHIP MATTERS, PEOPLE!

So, the story so far is that three prairies planted in the same area, within a few years of each other, showed remarkably similar patterns of plant community assembly over 20 years or so. All three of those sites have been managed with the same basic stewardship approach that combines prescribed fire and grazing. Patch-burn grazing is probably the best overall description of the approach, but it’s been modified to include periodic full seasons of rest from grazing.

Cattle grazing a recently burned patch of the Derr West restoration in 2021. The abundance of annual sunflowers are a response to the fire (triggers germination) but there are perennial sunflowers mixed in too.

While those three sites have been managed in basically the same way, we did build a nine acre exclosure in the Derr West restoration before we first grazed the site (in year 8 of its life). It receives the same frequency of burning (every 3-5 years) as the surrounding areas but isn’t grazed. It’s far from a perfect test or comparison (it’s not replicated and it’s in the corner of the larger site) but it does allow us a glimpse of how plant species might have established and acted if we were using fire but not grazing.

The following graphs illustrate the response of plants inside and outside of that exclosure at the Derr West restoration. I’m showing annual data here (not every other year) because I have it for this particular site. The first set of graphs below show three plant species for which grazing doesn’t seem to matter one way or the other. Big bluestem and stiff sunflower have maintained very steady patterns of abundance in both the grazed area and the exclosure. Canada goldenrod has a higher abundance in the ungrazed area, but that seems independent of grazing and the periodic ups and downs of its populations are nearly identical inside and outside of the grazing exclosure.

Big bluestem, stiff sunflower, and Canada goldenrod occurrence patterns with and without grazing at the Derr West restoration.

The story changes, though, when we look at the four graminoid species my previous graphs showed are steadily increasing at all three sites. Switchgrass looks like grazing doesn’t affect it much, but Indiangrass, Kentucky bluegrass, and the short-beaked sedge all seem to increase much faster under grazing. The results are pretty dramatic for Indiangrass and Kentucky bluegrass, in particular. If this is representative, the patterns of establishment for these species would have been very different if we’d not been grazing our sites during the later stages of their development. Since these graminoids are major components of the plant community, it’s intriguing to think about the ramifications of that.

Different reactions to grazing are apparent within these four graminoid species.

Finally, here are two examples of forbs that seem to show opposite reactions to grazing from each other. Maximilian sunflower (Helianthus maximiliani) has increased over time in the grazing exclosure, but has remained at a steady population level where it is being grazed. In contrast, upright prairie coneflower (Ratibida columnifera) has mostly disappeared from the exclosure, but is still around (more in some years than others) in the grazed part of the site.

Maximilian sunflower (left) and upright prairie coneflower (right) in grazed and ungrazed areas.

Comparing the broader plant communities between the grazed and ungrazed portions of the Derr West restoration is difficult because, again, the single grazing exclosure is in a corner of the larger site and doesn’t have the variation of soils found across the bigger ungrazed area. However, it is interesting to look at the trajectories of each since grazing first started in 2009 (second year of the graphs shown below).

Mean floristic quality (left) and mean species richness (right) between the ungrazed exclosure (blue) and broader grazed site (red) at the Derr West 2002 Restoration. Error bars indicate 95% confidence intervals.

Mean floristic quality hasn’t really changed over time in either site. Mean species richness, however, has increased in the grazed area, gaining an average of 2 species per 1×1 meter plot over time (except in 2020 when excessive thatch suppressed growth). Does that make the grazed site better? Not necessarily, but the difference is intriguing.

Both the grazed and ungrazed areas still have diverse and interesting plant communities, but the management does affect both individual plant species and the broader community composition. In addition, of course, the grazing has big impacts on habitat structure, which is the primary reason we’re using it in the first place. There is a lot more habitat heterogeneity across the grazed site, providing for a more diverse animal community.

So, what can we draw from this long data-heavy post? During the community assembly stages of three restored plant communities, at least many of the major plant species followed remarkably similar trajectories of establishment. In some ways, that should be expected, given the similar sites, seed mixes, and weather patterns. On the other hand, anyone who has spent many years doing restoration work knows how variable results can be from year to year and site to site.

The species establishment trajectories at those three sites, however, seems to have been significantly influenced by management – at least for some species. If we can extrapolate from the grazing exclosure in the Derr West restoration, modified patch-burn grazing increased the establishment rate of some major grasses, but also the overall species richness (at the 1×1 meter scale).

This August 2015 photo shows the Derr Pivot restoration, full of stiff sunflower, prairie sand reed, and other plants. That plant community is still dynamic, with some species continuing to increase in abundance and others alternating between rare and abundant based on weather and management conditions.

The opportunity to watch plant communities emerge from bare ground and broadcast seed has been one of the most fascinating aspects of my career. We throw one seed mix across a large area and plant species sort themselves into communities that match soil and topography variation. Sometimes, that sorting process matches my expectations, but there are always surprises. Being able to go back and study that process via data helps me understand some of what I watched, but also introduces lots of new questions. I hope I get to watch these same sites for at least another 20 years or so because I don’t think the stories are going to get any less compelling.

Stories in the Snow

Snow is a precious gift to those of us who wonder what happens in prairies when we’re not around. You can learn a lot about animal activity just by walking across a snow-covered grassland. All it takes is a little observation and deduction.

I know there are gadgets like trail cameras that are also helpful, of course. If you combine savvy scouting and a deep understanding of animal behavior (or get really lucky), you might put a camera in the right place to capture a photo of a coyote, badger, or other animal walking by. Or you might not.

Unlike trail cameras, though, a good snowfall covers every inch of a prairie and provides a pretty full record of every (non-flying) animal that moves across its surface. Sure, you have to do some interpretation of tracks and other signs to figure out what happened, but that’s a lot of the fun! There’s not much mystery in looking at a photo of a coyote walking past a camera. “Hey,” you say, “there’s a coyote.”

Whoop-de-do.

Plus, where did the coyote go after it went past the camera? Good luck learning that important information from a little box strapped to a fence post. The snow will tell you, though. The snow knows all.

While snow is really good at displaying animal tracks, you can even learn a little about what happened to plants from reading patterns in the snow. For example, the pattern traced by this grass leaf in the snow told me the wind had been blowing recently. How else would you figure that out??

Over the weekend, I spent a very pleasant couple hours wandering our family prairie and reading stories of animal behavior told by the snow that fell late last week. For one thing, I learned there’s a fox hanging out at the prairie. That was the first time I’ve seen any sign of a fox at our prairie. We’ve always had a lot of badger activity, and coyotes and skunks are fairly common, but – for whatever reason – that was the first evidence of a fox that has ever caught my attention. Now, we’ve surely had foxes around, and it’s very possible that the fox who made those tracks has lived in our prairie for several years, but now I have proof. Hooray for snow!

The stars of this weekend’s snow stories, though, were mice. I’m not sophisticated enough to identify mouse species from their tracks, but whatever species are out there seem to have pretty good population numbers! Usually, I was able to follow the footprints back to a hole in the snow somewhere. And most of the time, the tracks leading out and back from that hole went in multiple directions. That made me wonder – was I seeing tracks of multiple mice coming out of the same nest? Or one mouse making multiple trips? And if it was the latter, I wonder how it decided which direction to go? See how much fun snow is? So many mysteries to ponder.

Two holes with mouse tracks leading in two directions (one set leading to the left and the other heading away toward the background of the photo). What do you think? Two different mice or one making multiple trips? And either way – why two holes??
These tracks were nice and clear. I’m guessing the absence of a tail mark is helpful in narrowing down the possible species identification, but I’m not even going to hazard a guess. Plus, I understand that sometimes the same mouse lets its tail hit the ground/snow and other times it doesn’t. That seems unfair.

I didn’t find evidence of mice actively foraging on any particular plants. For example, I didn’t find any obvious examples of tracks leading to a plant stem or scattered bits of seed head on the snow that would indicate a mouse harvesting seed. However, I did find what looked like a food cache. It was 25 yards or so away from the boundary between our prairie and the neighbor’s soybean field. There were numerous tracks heading to the field and a hole in the snow with some soybeans piled in the bottom of it.

Was this an old cache the mouse had re-located and excavated to get to previously-stored seeds? Or was it taking advantage of good weather to make a new cache? Since there was snow covering the soybean field, I guessed it wasn’t actively searching for food there, but rather taking advantage of soybeans it had stashed earlier. I didn’t spend enough time following tracks back and forth to confirm my hypothesis – just being able to make a hypothesis was enough for me. I wished the little critter well and walked on.

An apparent food cache with tracks leading to and from its location.
A close-up of the cache, clearly showing the soybeans within it.
I saw coyote tracks in several places, which made me happy. We had an active den several years ago, but it’s been a while since I’ve seen one in the flesh. I’m glad they’re still around.
Here’s another apparent mouse den site with tracks (or maybe another food cache that was just deeper in the snow? I’m betting den site/nest.

I saw both coyote and mouse tracks around, so I figured there must be some hunting happening, and eventually found evidence to confirm that. I’m not sure exactly what happened (see the next photo) but I’m guessing it turned out poorly for the mouse. When it comes to figuring out what mice are doing and where they’re doing it, I wonder if snow is as helpful to coyotes as it is to me? I didn’t ever see coyote tracks obviously following mouse tracks, which seems like a viable hunting strategy, but what do I know?

And here’s evidence of an interaction between coyote and mouse. Maybe the coyote heard or saw a mouse and went after it. Or maybe it saw the kinds of holes I’d been seeing and dug around a little to see if anyone was home. I’ll never know, but it was entertaining to speculate.

As entertaining as it was, I didn’t just follow mouse, fox and coyote tracks around all morning. As I walked, I spotted some sparrows, meadowlarks, and what I think was a flock of horned larks (they were a long way away). I also spent a little time reflecting on how last year’s grazing patterns affected the winter habitat and animal activity/signs I was seeing. Eventually, I grabbed my macro lens and settled into my winter comfort zone of photographing sideoats grama seed heads, ‘snow windows’ and other small wonders.

Sideoats grama in the snow.
Curly-cup gumweed through a ‘snow window’.
More curly-cup gumweed.
Another snow window, with heath aster peeking out.

We haven’t had a whole lot of snow over the last few winters, and when it does snow, it doesn’t last very long. As I write this, most of last week’s snowfall has already melted, as per usual. Since we’re in a drought, the snow would be helpful, purely for its water content. But regardless of the moisture benefits, snow just makes winters more fun, especially if you’re like me and enjoy the stories told by a snow-covered prairie.